Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vrr-nuc domain-containing protein | BST98_RS21535 | Not Available | Negative | 159119 - 159841 | 27209.3 |
| hypothetical protein | BST98_RS21540 | Not Available | Negative | 159846 - 160232 | 15241.8 |
| duf6884 domain-containing protein | BST98_RS21545 | Not Available | Negative | 160419 - 160979 | 21120.8 |
| hypothetical protein | BST98_RS21550 | Not Available | Negative | 161078 - 161653 | 21912.7 |
| hypothetical protein | BST98_RS21555 | Not Available | Negative | 161894 - 162748 | 32973.4 |
| hypothetical protein | BST98_RS21560 | Not Available | Positive | 163005 - 163310 | 11821.5 |
| wgr domain-containing protein | BST98_RS21570 | Not Available | Positive | 165092 - 165736 | 24206.5 |
| hypothetical protein | BST98_RS21575 | Not Available | Positive | 165810 - 166082 | 10375.3 |
| hypothetical protein | BST98_RS21580 | Not Available | Positive | 166090 - 166818 | 27637.2 |
| hypothetical protein | BST98_RS21585 | Not Available | Positive | 166983 - 167690 | 26430.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

