Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS22420 | Not Available | Positive | 147489 - 147704 | 8213.06 |
| hypothetical protein | BST98_RS21480 | Not Available | Positive | 147644 - 148990 | 51000.1 |
| hypothetical protein | BST98_RS21485 | Not Available | Positive | 149284 - 150042 | 28768.3 |
| prtrc system thif family protein | BST98_RS21495 | Not Available | Positive | 150760 - 151539 | 28523.9 |
| phosphoadenosine phosphosulfate reductase family protein | BST98_RS21500 | Not Available | Positive | 151921 - 154098 | 82141.8 |
| is4-like element isvsa5 family transposase | BST98_RS21510 | Not Available | Positive | 154202 - 155410 | 46076.1 |
| hypothetical protein | BST98_RS21515 | Not Available | Positive | 155407 - 155652 | 9523.4 |
| hypothetical protein | BST98_RS21520 | Not Available | Negative | 155719 - 156039 | 12072.0 |
| signal peptidase i | BST98_RS21525 | Not Available | Negative | 156106 - 156720 | 23174.1 |
| brct domain-containing protein | BST98_RS21530 | Not Available | Positive | 157048 - 158970 | 70398.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

