Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein | BST98_RS22565 | Not Available | Negative | 132551 - 132631 | 2827.5 |
| recombinase family protein | BST98_RS21425 | Not Available | Positive | 132703 - 133248 | 20085.2 |
| chemotaxis protein | BST98_RS21430 | Not Available | Negative | 133301 - 135550 | 86054.6 |
| is4-like element isvsa5 family transposase | BST98_RS21440 | Not Available | Positive | 135655 - 136863 | 46030.1 |
| replication initiator protein rctb domain-containing protein | BST98_RS21450 | Not Available | Positive | 139410 - 141305 | 72838.2 |
| aaa family atpase | BST98_RS21455 | Not Available | Positive | 141547 - 142761 | 45460.9 |
| hypothetical protein | BST98_RS21460 | Not Available | Positive | 142774 - 143925 | 43109.5 |
| parb/repb/spo0j family partition protein | BST98_RS21465 | Not Available | Positive | 144790 - 146643 | 69349.9 |
| hypothetical protein | BST98_RS21470 | Not Available | Positive | 146736 - 147221 | 17314.5 |
| hypothetical protein | BST98_RS21475 | Not Available | Positive | 147264 - 147479 | 8111.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

