Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1380 family transposase | BST98_RS21345 | Not Available | Negative | 122943 - 124352 | 52804.1 |
| nitroreductase family protein | BST98_RS21350 | Not Available | Positive | 124552 - 125148 | 22156.0 |
| chemotaxis protein | BST98_RS21360 | Not Available | Positive | 125611 - 126786 | 45226.5 |
| is30-like element isva6 family transposase | BST98_RS21365 | Not Available | Negative | 126816 - 127784 | 38501.1 |
| mbl fold metallo-hydrolase | BST98_RS21375 | Not Available | Positive | 128207 - 128848 | 23672.5 |
| quaternary ammonium compound efflux smr transporter qace delta 1 | BST98_RS21385 | Not Available | Positive | 129332 - 129679 | 12332.6 |
| sulfonamide-resistant dihydropteroate synthase sul1 | BST98_RS21390 | Not Available | Positive | 129673 - 130512 | 30128.0 |
| gnat family n-acetyltransferase | BST98_RS21400 | Not Available | Positive | 130640 - 131140 | 18311.7 |
| chemotaxis protein | BST98_RS22560 | Not Available | Positive | 131461 - 131529 | 2472.04 |
| is6-like element is6100 family transposase | BST98_RS21410 | Not Available | Positive | 131647 - 132411 | 29684.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

