Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr/smtb family transcription factor | BST98_RS21290 | Not Available | Positive | 114252 - 114938 | 25297.6 |
| tetracycline resistance transcriptional repressor tetr(b) | BST98_RS21295 | Not Available | Negative | 114916 - 115539 | 23355.0 |
| tetracycline efflux mfs transporter tet(b) | BST98_RS21300 | Not Available | Positive | 115621 - 116826 | 43248.8 |
| tetracyline resistance-associated transcriptional repressor tetc | BST98_RS21305 | Not Available | Negative | 116939 - 117532 | 22747.6 |
| chemotaxis protein | BST98_RS21310 | Not Available | Positive | 117620 - 118006 | 15636.9 |
| is4-like element isvsa5 family transposase | BST98_RS21315 | Not Available | Negative | 118046 - 119254 | 46076.1 |
| tetracycline resistance determinant leader peptide | BST98_RS21320 | Not Available | Positive | 119379 - 119465 | 3376.23 |
| tetracycline resistance ribosomal protection protein tet(m) | BST98_RS21325 | Not Available | Positive | 119481 - 121400 | 72575.7 |
| chemotaxis protein | BST98_RS21330 | Not Available | Positive | 121519 - 121680 | 6295.77 |
| chemotaxis protein | BST98_RS21335 | Not Available | Negative | 121695 - 122903 | 45887.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

