Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4-like element isvsa5 family transposase | BST98_RS21240 | Not Available | Positive | 102958 - 104166 | 46076.1 |
| laci family dna-binding transcriptional regulator | BST98_RS21245 | Not Available | Negative | 104621 - 105607 | 35831.2 |
| sucrose-specific pts transporter subunit iibc | BST98_RS21250 | Not Available | Positive | 105842 - 107281 | 50480.5 |
| aminoimidazole riboside kinase | BST98_RS21255 | Not Available | Positive | 107438 - 108433 | 35787.3 |
| sucrose-6-phosphate hydrolase | BST98_RS21260 | Not Available | Positive | 108430 - 109875 | 55079.6 |
| chemotaxis protein | BST98_RS21265 | Not Available | Negative | 110151 - 110409 | 8996.76 |
| chemotaxis protein | BST98_RS21270 | Not Available | Negative | 110748 - 111956 | 45887.5 |
| chemotaxis protein | BST98_RS21275 | Not Available | Negative | 112061 - 113101 | 36990.7 |
| antibiotic biosynthesis monooxygenase family protein | BST98_RS21280 | Not Available | Positive | 113545 - 113865 | 12500.9 |
| hypothetical protein | BST98_RS21285 | Not Available | Positive | 113858 - 114244 | 13818.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

