Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS21145 | Not Available | Negative | 75401 - 75604 | 7949.47 |
| single-stranded dna-binding protein | BST98_RS22640 | Not Available | Negative | 75724 - 76791 | 40383.4 |
| atp-dependent helicase | BST98_RS21155 | Not Available | Negative | 77661 - 79508 | 69456.0 |
| hypothetical protein | BST98_RS21160 | Not Available | Positive | 80139 - 80975 | 30894.8 |
| conjugal transfer protein tran | BST98_RS21165 | Not Available | Negative | 81132 - 85418 | 157846.0 |
| trau family protein | BST98_RS21170 | Not Available | Negative | 85618 - 86763 | 42090.5 |
| hypothetical protein | BST98_RS22625 | Not Available | Negative | 86774 - 86908 | 5079.35 |
| trbc family f-type conjugative pilus assembly protein | BST98_RS21175 | Not Available | Negative | 86911 - 88233 | 49265.5 |
| s26 family signal peptidase | BST98_RS21180 | Not Available | Negative | 88220 - 88747 | 19238.4 |
| hypothetical protein | BST98_RS21185 | Not Available | Positive | 89263 - 89778 | 18821.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

