Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS21085 | Not Available | Negative | 64559 - 65074 | 19607.1 |
| hypothetical protein | BST98_RS21090 | Not Available | Negative | 65181 - 65771 | 22382.5 |
| hypothetical protein | BST98_RS21095 | Not Available | Negative | 65850 - 66278 | 16675.5 |
| hypothetical protein | BST98_RS21100 | Not Available | Negative | 66371 - 66634 | 9892.52 |
| toprim domain-containing protein | BST98_RS21105 | Not Available | Negative | 67121 - 68287 | 43138.9 |
| hypothetical protein | BST98_RS21110 | Not Available | Negative | 68433 - 68717 | 10760.8 |
| vwa domain-containing protein | BST98_RS21115 | Not Available | Negative | 68847 - 70763 | 69821.3 |
| duf3150 domain-containing protein | BST98_RS21120 | Not Available | Negative | 70886 - 72223 | 48513.7 |
| atp-binding protein | BST98_RS21130 | Not Available | Negative | 72656 - 73831 | 44686.5 |
| hypothetical protein | BST98_RS21135 | Not Available | Negative | 73986 - 74858 | 32569.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

