Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase rect | BST98_RS21035 | Not Available | Positive | 55862 - 56857 | 37827.8 |
| hypothetical protein | BST98_RS21040 | Not Available | Positive | 56926 - 57222 | 10762.0 |
| hypothetical protein | BST98_RS21045 | Not Available | Positive | 57284 - 57856 | 21495.1 |
| duf2913 family protein | BST98_RS21050 | Not Available | Positive | 57930 - 58619 | 26260.6 |
| hypothetical protein | BST98_RS21055 | Not Available | Negative | 58735 - 59679 | 36171.3 |
| hypothetical protein | BST98_RS21060 | Not Available | Negative | 59787 - 60599 | 30531.7 |
| hypothetical protein | BST98_RS21065 | Not Available | Negative | 60820 - 61323 | 19321.3 |
| hypothetical protein | BST98_RS21070 | Not Available | Negative | 61436 - 62362 | 35447.7 |
| hypothetical protein | BST98_RS21075 | Not Available | Negative | 62461 - 63381 | 35030.4 |
| hypothetical protein | BST98_RS21080 | Not Available | Negative | 63487 - 64476 | 38200.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

