Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS20700 | Not Available | Positive | 6467 - 6781 | 11719.9 |
| hypothetical protein | BST98_RS20705 | Not Available | Positive | 6940 - 7221 | 10620.8 |
| hypothetical protein | BST98_RS20710 | Not Available | Positive | 7390 - 8211 | 31080.1 |
| hypothetical protein | BST98_RS20715 | Not Available | Positive | 8354 - 8560 | 7866.4 |
| duf1870 family protein | BST98_RS20720 | Not Available | Positive | 8603 - 8962 | 14023.6 |
| is3 family transposase | BST98_RS20730 | Not Available | Negative | 9374 - 10551 | 45560.9 |
| Ncrna_class:hammerhead_ribozyme | Not Available | Not Available | Positive | 41509 - 41580 | Not Available |
| hypothetical protein | BST98_RS21020 | Not Available | Negative | 51977 - 52648 | 24570.9 |
| hypothetical protein | BST98_RS21025 | Not Available | Positive | 53817 - 54602 | 28662.6 |
| recombinase rect | BST98_RS21030 | Not Available | Positive | 54607 - 55737 | 41969.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

