Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | BST98_RS20960 | Not Available | Negative | 42728 - 42961 | 8663.06 |
| Hypothetical protein | BST98_RS20965 | Not Available | Negative | 42976 - 43584 | 22696.9 |
| Hypothetical protein | BST98_RS20970 | Not Available | Negative | 43688 - 43924 | 8838.81 |
| hypothetical protein | BST98_RS20975 | Not Available | Negative | 43908 - 44237 | 12229.7 |
| Transposase b | BST98_RS20980 | Not Available | Negative | 44230 - 45174 | 34966.3 |
| Transposase | BST98_RS20985 | Not Available | Negative | 45283 - 47280 | 75515.8 |
| Dna-binding protein ner | BST98_RS20990 | Not Available | Negative | 47291 - 47512 | 8203.93 |
| Phage repressor | BST98_RS20995 | Not Available | Positive | 47720 - 48433 | 26804.2 |
| calx-beta domain-containing protein | BST98_RS21000 | Not Available | Negative | 48694 - 50133 | 52358.3 |
| Dna-binding hu protein | BST98_RS21005 | Not Available | Negative | 50385 - 50660 | 9786.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

