Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | BST98_RS20860 | Not Available | Negative | 30464 - 30766 | 11029.2 |
| Major head subunit | BST98_RS20865 | Not Available | Negative | 30797 - 31696 | 32687.4 |
| I protein | BST98_RS20870 | Not Available | Negative | 31693 - 32649 | 34802.7 |
| Virion morphogenesis protein | BST98_RS20875 | Not Available | Negative | 32944 - 33723 | 29737.8 |
| Hypothetical protein | BST98_RS20880 | Not Available | Negative | 33716 - 35260 | 57337.3 |
| Portal protein | BST98_RS20885 | Not Available | Negative | 35257 - 36810 | 58322.9 |
| Hypothetical protein | BST98_RS20890 | Not Available | Negative | 36810 - 37391 | 21279.0 |
| Hypothetical protein | BST98_RS20895 | Not Available | Negative | 37402 - 37695 | 10636.9 |
| Hypothetical protein | BST98_RS20900 | Not Available | Negative | 37713 - 38021 | 11883.7 |
| C4-type zinc finger protein | BST98_RS20905 | Not Available | Negative | 38021 - 38239 | 8547.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

