Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage tail tape measure protein | BST98_RS20810 | Not Available | Negative | 23734 - 25647 | 67322.8 |
| Extracellular solute-binding protein family 7 protein | BST98_RS20815 | Not Available | Negative | 25773 - 26117 | 12564.2 |
| Tail tube protein | BST98_RS20820 | Not Available | Negative | 26120 - 26476 | 12742.9 |
| Tail sheath protein | BST98_RS20825 | Not Available | Negative | 26487 - 27965 | 53519.7 |
| Hypothetical protein | BST98_RS20830 | Not Available | Negative | 27967 - 28131 | 6114.62 |
| Hypothetical protein | BST98_RS20835 | Not Available | Negative | 28103 - 28780 | 24991.7 |
| Phage virion morphogenesis protein | BST98_RS20840 | Not Available | Negative | 28777 - 29316 | 20274.9 |
| Hypothetical protein | BST98_RS20845 | Not Available | Negative | 29316 - 29750 | 16493.7 |
| Hypothetical protein | BST98_RS20850 | Not Available | Negative | 29750 - 30160 | 14779.2 |
| Hypothetical protein | BST98_RS20855 | Not Available | Negative | 30189 - 30455 | 9437.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

