Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Orf38 | BST98_RS22410 | Not Available | Negative | 15538 - 15681 | 5304.18 |
| Gp20 protein | BST98_RS20765 | Not Available | Negative | 15997 - 16947 | 36142.4 |
| Gp19 protein | BST98_RS20770 | Not Available | Negative | 16944 - 17303 | 13953.5 |
| Hypothetical protein | BST98_RS20775 | Not Available | Negative | 17361 - 18653 | 46018.6 |
| Hypothetical protein | BST98_RS20780 | Not Available | Negative | 18667 - 19302 | 24583.2 |
| Baseplate j-like protein | BST98_RS20785 | Not Available | Negative | 19287 - 20354 | 38228.3 |
| Muv-like tail protein | BST98_RS20790 | Not Available | Negative | 20344 - 20799 | 16518.8 |
| Putative baseplate assembly protein | BST98_RS20795 | Not Available | Negative | 20804 - 21358 | 20123.1 |
| Putative tail protein | BST98_RS20800 | Not Available | Negative | 21352 - 22410 | 38334.0 |
| Tail/dna circulation protein | BST98_RS20805 | Not Available | Negative | 22403 - 23722 | 47834.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

