Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l34 | BST98_RS14730 | Not Available | Negative | 3186994 - 3187131 | 5253.62 |
| amino acid abc transporter atp-binding protein | BST98_RS14735 | Not Available | Negative | 3187316 - 3188050 | 27309.2 |
| amino acid abc transporter permease | BST98_RS14740 | Not Available | Negative | 3188047 - 3188718 | 24925.4 |
| amino acid abc transporter substrate-binding protein | BST98_RS14745 | Not Available | Negative | 3188754 - 3189509 | 28168.6 |
| Hypothetical protein | BST98_RS20735 | Not Available | Negative | 10754 - 11410 | 24773.1 |
| gamma-mobile-trio protein gmtx | BST98_RS22580 | Not Available | Negative | 11780 - 12388 | 22577.9 |
| duf1566 domain-containing protein | BST98_RS20745 | Not Available | Negative | 12687 - 13307 | 22793.7 |
| duf1566 domain-containing protein | BST98_RS20750 | Not Available | Negative | 13304 - 14176 | 32319.1 |
| Putative tail fiber assembly protein | BST98_RS20755 | Not Available | Negative | 14224 - 14781 | 21238.2 |
| Tail protein | BST98_RS20760 | Not Available | Negative | 14781 - 15554 | 28020.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

