Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit i | BST98_RS14680 | Not Available | Negative | 3177422 - 3177811 | 13913.8 |
| parb/repb/spo0j family partition protein | BST98_RS14685 | Not Available | Negative | 3177996 - 3178877 | 32287.0 |
| para family protein | BST98_RS14690 | Not Available | Negative | 3178894 - 3179691 | 28950.9 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | BST98_RS14695 | Not Available | Negative | 3179708 - 3180328 | 23326.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | BST98_RS14700 | Not Available | Negative | 3180338 - 3182227 | 69994.0 |
| fmn-binding protein mioc | BST98_RS14705 | Not Available | Negative | 3182664 - 3183104 | 15845.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | BST98_RS14710 | Not Available | Negative | 3183273 - 3184640 | 49852.6 |
| membrane protein insertase yidc | BST98_RS14715 | Not Available | Negative | 3184776 - 3186398 | 60663.4 |
| membrane protein insertion efficiency factor yidd | BST98_RS14720 | Not Available | Negative | 3186401 - 3186658 | 9435.64 |
| ribonuclease p protein component | BST98_RS14725 | Not Available | Negative | 3186625 - 3186981 | 13681.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

