Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr family dna-binding transcription regulator | BST98_RS14630 | Not Available | Negative | 3168334 - 3169101 | 27998.3 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | BST98_RS14635 | Not Available | Negative | 3169308 - 3170666 | 48539.0 |
| f0f1 atp synthase subunit epsilon | BST98_RS14640 | Not Available | Negative | 3170857 - 3171279 | 15144.3 |
| f0f1 atp synthase subunit beta | BST98_RS14645 | Not Available | Negative | 3171297 - 3172703 | 50779.9 |
| f0f1 atp synthase subunit gamma | BST98_RS14650 | Not Available | Negative | 3172736 - 3173602 | 31871.3 |
| f0f1 atp synthase subunit alpha | BST98_RS14655 | Not Available | Negative | 3173647 - 3175188 | 55689.7 |
| f0f1 atp synthase subunit delta | BST98_RS14660 | Not Available | Negative | 3175205 - 3175738 | 19427.4 |
| f0f1 atp synthase subunit b | BST98_RS14665 | Not Available | Negative | 3175754 - 3176224 | 17323.0 |
| f0f1 atp synthase subunit c | BST98_RS14670 | Not Available | Negative | 3176301 - 3176558 | 8691.19 |
| f0f1 atp synthase subunit a | BST98_RS14675 | Not Available | Negative | 3176628 - 3177413 | 28869.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

