Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS14580 | Not Available | Negative | 3157748 - 3157963 | 8523.23 |
| hypothetical protein | BST98_RS22325 | Not Available | Negative | 3158022 - 3158225 | 7654.08 |
| acetolactate synthase 2 catalytic subunit | BST98_RS14590 | Not Available | Positive | 3158791 - 3160437 | 59361.5 |
| acetolactate synthase 2 small subunit | BST98_RS14595 | Not Available | Positive | 3160440 - 3160697 | 9743.02 |
| branched-chain amino acid transaminase | BST98_RS14600 | Not Available | Positive | 3160737 - 3161666 | 34000.4 |
| dihydroxy-acid dehydratase | BST98_RS14605 | Not Available | Positive | 3161775 - 3163616 | 65774.4 |
| threonine ammonia-lyase, biosynthetic | BST98_RS14610 | Not Available | Positive | 3163618 - 3165177 | 57035.4 |
| helix-turn-helix transcriptional regulator | BST98_RS14615 | Not Available | Negative | 3165253 - 3165618 | 14022.9 |
| helix-turn-helix transcriptional regulator | BST98_RS14620 | Not Available | Negative | 3165868 - 3166242 | 14615.6 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | BST98_RS14625 | Not Available | Negative | 3166484 - 3168316 | 66797.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

