Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS22320 | Not Available | Positive | 3145794 - 3145967 | 6395.45 |
| yihd family protein | BST98_RS14535 | Not Available | Positive | 3146143 - 3146409 | 10248.5 |
| cytochrome c oxidase accessory protein ccog | BST98_RS14540 | Not Available | Positive | 3146599 - 3147936 | 51410.7 |
| serine/threonine protein kinase | BST98_RS14545 | Not Available | Positive | 3147979 - 3148968 | 38598.6 |
| thiol:disulfide interchange protein dsba/dsbl | BST98_RS14550 | Not Available | Positive | 3149055 - 3149657 | 22450.1 |
| yifb family mg chelatase-like aaa atpase | BST98_RS14555 | Not Available | Negative | 3149725 - 3151257 | 55180.9 |
| hypothetical protein | BST98_RS14560 | Not Available | Positive | 3151694 - 3152818 | 42405.9 |
| recombinase family protein | BST98_RS14565 | Not Available | Negative | 3152838 - 3153590 | 27766.0 |
| s8 family peptidase | BST98_RS14570 | Not Available | Negative | 3153754 - 3156363 | 97566.8 |
| aaa family atpase | BST98_RS14575 | Not Available | Negative | 3156377 - 3157351 | 36746.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

