Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 3111253 - 3114145 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3114401 - 3114476 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3114506 - 3114581 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 3114583 - 3114658 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3114757 - 3116308 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3116695 - 3116810 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3116971 - 3119862 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3120178 - 3121729 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3122116 - 3122231 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3122392 - 3125284 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

