Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-disulfide reductase | BST98_RS14330 | Not Available | Positive | 3098295 - 3099650 | 48497.2 |
| iron-containing alcohol dehydrogenase | BST98_RS14335 | Not Available | Negative | 3099813 - 3100964 | 40887.1 |
| yjih family protein | BST98_RS14340 | Not Available | Positive | 3101450 - 3102817 | 49057.3 |
| hypothetical protein | BST98_RS14345 | Not Available | Positive | 3103140 - 3104543 | 51157.6 |
| abc transporter permease | BST98_RS14350 | Not Available | Negative | 3104604 - 3105545 | 34701.0 |
| abc transporter permease | BST98_RS14355 | Not Available | Negative | 3105548 - 3106525 | 35566.2 |
| abc transporter substrate-binding protein | BST98_RS14360 | Not Available | Negative | 3106582 - 3108141 | 58059.3 |
| dipeptide abc transporter atp-binding protein | BST98_RS14365 | Not Available | Negative | 3108202 - 3109929 | 63936.3 |
| Trna-asp | Not Available | Not Available | Positive | 3110872 - 3110948 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3111026 - 3111141 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

