Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator asnc | BST98_RS14230 | Not Available | Positive | 3079546 - 3080007 | 17257.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | BST98_RS22650 | Not Available | Negative | 3080066 - 3080743 | 24278.2 |
| hypothetical protein | BST98_RS14240 | Not Available | Negative | 3080894 - 3081106 | 8013.58 |
| cold-shock protein | BST98_RS14245 | Not Available | Negative | 3081402 - 3081611 | 7391.69 |
| nad(p)/fad-dependent oxidoreductase | BST98_RS14250 | Not Available | Negative | 3081923 - 3083110 | 43354.9 |
| universal stress protein uspb | BST98_RS14255 | Not Available | Negative | 3083253 - 3083591 | 12915.2 |
| non-heme ferritin | BST98_RS14260 | Not Available | Negative | 3083675 - 3084202 | 19860.5 |
| universal stress protein | BST98_RS14265 | Not Available | Positive | 3084457 - 3084879 | 15405.6 |
| carboxylate/amino acid/amine transporter | BST98_RS14270 | Not Available | Positive | 3084991 - 3085884 | 32831.1 |
| nad(p)h-flavin reductase | BST98_RS14275 | Not Available | Negative | 3085979 - 3086683 | 25823.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

