Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps translocon maturation chaperone lptm | BST98_RS14180 | Not Available | Negative | 3066805 - 3066921 | 4099.06 |
| iron donor protein cyay | BST98_RS14185 | Not Available | Positive | 3067001 - 3067312 | 11923.7 |
| class i adenylate cyclase | BST98_RS14190 | Not Available | Negative | 3067386 - 3069959 | 99061.2 |
| hydroxymethylbilane synthase | BST98_RS14195 | Not Available | Positive | 3070365 - 3071297 | 33899.0 |
| uroporphyrinogen-iii synthase | BST98_RS14200 | Not Available | Positive | 3071297 - 3072052 | 27931.6 |
| uroporphyrinogen-iii c-methyltransferase | BST98_RS14205 | Not Available | Positive | 3072057 - 3073337 | 46684.3 |
| heme biosynthesis protein hemy | BST98_RS14210 | Not Available | Positive | 3073334 - 3074521 | 43601.8 |
| hypothetical protein | BST98_RS14215 | Not Available | Negative | 3074866 - 3075330 | 16666.6 |
| class i sam-dependent methyltransferase | BST98_RS14220 | Not Available | Negative | 3075421 - 3076194 | 27959.8 |
| bifunctional diguanylate cyclase/phosphodiesterase | BST98_RS14225 | Not Available | Negative | 3076230 - 3079385 | 119751.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

