Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | BST98_RS01360 | Not Available | Negative | 264208 - 265278 | 40096.1 |
| gumc family protein | BST98_RS01365 | Not Available | Negative | 265282 - 266721 | 54893.0 |
| hypothetical protein | BST98_RS01370 | Not Available | Negative | 266721 - 267071 | 13335.4 |
| glycosyltransferase family 1 protein | BST98_RS01375 | Not Available | Negative | 267171 - 268274 | 42377.2 |
| o-antigen ligase family protein | BST98_RS01380 | Not Available | Negative | 268275 - 269597 | 48971.0 |
| lipopolysaccharide biosynthesis protein | BST98_RS22280 | Not Available | Negative | 269594 - 270943 | 49695.0 |
| glycosyltransferase | BST98_RS01390 | Not Available | Negative | 270940 - 272076 | 42303.2 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 272581 - 274132 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 274231 - 274306 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 274308 - 274383 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

