Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | BST98_RS14035 | Not Available | Negative | 3030830 - 3031369 | 20277.4 |
| translational gtpase typa | BST98_RS14040 | Not Available | Negative | 3031556 - 3033385 | 67317.2 |
| glutamate--ammonia ligase | BST98_RS14045 | Not Available | Positive | 3033969 - 3035378 | 51630.2 |
| duf4124 domain-containing protein | BST98_RS14050 | Not Available | Positive | 3035503 - 3036069 | 20965.1 |
| nitrogen regulation protein nr(ii) | BST98_RS14055 | Not Available | Positive | 3036170 - 3037231 | 39301.9 |
| nitrogen regulation protein nr(i) | BST98_RS14060 | Not Available | Positive | 3037249 - 3038661 | 52730.0 |
| adenosine deaminase | BST98_RS14065 | Not Available | Positive | 3038854 - 3039858 | 36307.6 |
| hypothetical protein | BST98_RS22610 | Not Available | Positive | 3040040 - 3040168 | 4169.08 |
| duf294 nucleotidyltransferase-like domain-containing protein | BST98_RS14070 | Not Available | Positive | 3040311 - 3042173 | 70577.0 |
| exonuclease domain-containing protein | BST98_RS14075 | Not Available | Positive | 3042170 - 3042883 | 26677.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

