Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein n | BST98_RS13935 | Not Available | Negative | 3010711 - 3011472 | 27237.5 |
| type ii secretion system protein m | BST98_RS13940 | Not Available | Negative | 3011474 - 3011953 | 18050.8 |
| type ii secretion system protein gspl | BST98_RS13945 | Not Available | Negative | 3011950 - 3013251 | 49059.7 |
| type ii secretion system minor pseudopilin gspk | BST98_RS13950 | Not Available | Negative | 3013220 - 3014224 | 37053.0 |
| type ii secretion system minor pseudopilin gspj | BST98_RS13955 | Not Available | Negative | 3014224 - 3014880 | 24909.7 |
| type ii secretion system minor pseudopilin gspi | BST98_RS13960 | Not Available | Negative | 3014864 - 3015226 | 13235.0 |
| type ii secretion system minor pseudopilin gsph | BST98_RS13965 | Not Available | Negative | 3015223 - 3015804 | 22268.8 |
| type ii secretion system major pseudopilin gspg | BST98_RS13970 | Not Available | Negative | 3015811 - 3016251 | 16088.1 |
| type ii secretion system inner membrane protein gspf | BST98_RS13975 | Not Available | Negative | 3016275 - 3017495 | 45012.9 |
| type ii secretion system atpase gspe | BST98_RS13980 | Not Available | Negative | 3017496 - 3019001 | 55667.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

