Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 2989756 - 2989871 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2989983 - 2992875 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2993131 - 2993206 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2993251 - 2993327 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2993399 - 2994950 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2995337 - 2995452 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2995564 - 2998456 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2998712 - 2998787 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2998832 - 2998908 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2998980 - 3000531 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

