Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate dehydrogenase | BST98_RS13735 | Not Available | Negative | 2968706 - 2969743 | 37645.0 |
| gnat family n-acetyltransferase | BST98_RS13740 | Not Available | Positive | 2969819 - 2970247 | 16671.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | BST98_RS13745 | Not Available | Positive | 2970364 - 2971713 | 51523.1 |
| isochorismatase family protein | BST98_RS13750 | Not Available | Positive | 2971724 - 2972362 | 23379.8 |
| Trna-asp | Not Available | Not Available | Positive | 2972915 - 2972991 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2973033 - 2973148 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2973260 - 2976152 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2976389 - 2976464 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2976509 - 2976585 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2976657 - 2978208 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

