Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 | BST98_RS13685 | Not Available | Negative | 2963533 - 2963961 | 14777.0 |
| transcription termination/antitermination protein nusg | BST98_RS13690 | Not Available | Negative | 2964087 - 2964632 | 20576.5 |
| preprotein translocase subunit sece | BST98_RS13695 | Not Available | Negative | 2964644 - 2965027 | 13637.9 |
| elongation factor tu | BST98_RS13700 | Not Available | Negative | 2965264 - 2966448 | 43012.5 |
| Trna-thr | Not Available | Not Available | Positive | 2966549 - 2966624 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2966635 - 2966709 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2966747 - 2966831 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 2966847 - 2966922 | Not Available |
| type iii pantothenate kinase | BST98_RS13725 | Not Available | Negative | 2967019 - 2967753 | 27215.1 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | BST98_RS13730 | Not Available | Negative | 2967753 - 2968709 | 34707.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

