Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltose/glucose-specific pts transporter subunit iibc | BST98_RS13585 | Not Available | Negative | 2937075 - 2938652 | 55620.0 |
| mal regulon transcriptional regulator mali | BST98_RS13590 | Not Available | Positive | 2938996 - 2940018 | 36890.8 |
| pyrimidine/purine nucleoside phosphorylase | BST98_RS13595 | Not Available | Negative | 2940168 - 2940449 | 10120.8 |
| zn(2+)-responsive transcriptional regulator | BST98_RS13600 | Not Available | Negative | 2940566 - 2941051 | 17955.4 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | BST98_RS13605 | Not Available | Positive | 2941275 - 2942873 | 57867.5 |
| phosphoribosylamine--glycine ligase | BST98_RS13610 | Not Available | Positive | 2942911 - 2944197 | 45730.6 |
| duf1481 domain-containing protein | BST98_RS13615 | Not Available | Negative | 2944320 - 2945012 | 25741.8 |
| nucleoid-associated protein hu-alpha | BST98_RS13620 | Not Available | Negative | 2945057 - 2945329 | 9445.35 |
| cnnm domain-containing protein | BST98_RS13625 | Not Available | Positive | 2945559 - 2946614 | 39303.9 |
| branched-chain amino acid transport system ii carrier protein | BST98_RS13630 | Not Available | Negative | 2946723 - 2948045 | 46318.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

