Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase | BST98_RS13535 | Not Available | Positive | 2926497 - 2928446 | 71848.1 |
| type ii 3-dehydroquinate dehydratase | BST98_RS13540 | Not Available | Positive | 2928952 - 2929404 | 16277.5 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | BST98_RS13545 | Not Available | Positive | 2929434 - 2929892 | 16048.3 |
| acetyl-coa carboxylase biotin carboxylase subunit | BST98_RS13550 | Not Available | Positive | 2929905 - 2931248 | 49423.7 |
| yhdt family protein | BST98_RS13555 | Not Available | Positive | 2931451 - 2931768 | 12125.8 |
| sodium/pantothenate symporter | BST98_RS13560 | Not Available | Positive | 2931761 - 2933218 | 51660.2 |
| 50s ribosomal protein l11 methyltransferase | BST98_RS13565 | Not Available | Positive | 2933406 - 2934290 | 32247.2 |
| trna dihydrouridine synthase dusb | BST98_RS13570 | Not Available | Positive | 2934467 - 2935432 | 35734.0 |
| dna-binding transcriptional regulator fis | BST98_RS13575 | Not Available | Positive | 2935455 - 2935751 | 11111.4 |
| maly/patb family protein | BST98_RS13580 | Not Available | Negative | 2935850 - 2937022 | 44216.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

