Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fxsa family protein | BST98_RS13485 | Not Available | Negative | 2912426 - 2912950 | 18853.1 |
| aspartate ammonia-lyase | BST98_RS13490 | Not Available | Positive | 2913415 - 2914875 | 52817.7 |
| anaerobic c4-dicarboxylate transporter | BST98_RS13495 | Not Available | Positive | 2914986 - 2916293 | 45464.9 |
| lysr family transcriptional regulator | BST98_RS13500 | Not Available | Positive | 2916760 - 2917677 | 34445.3 |
| response regulator | BST98_RS13505 | Not Available | Positive | 2917803 - 2918432 | 22999.1 |
| marc family protein | BST98_RS13510 | Not Available | Positive | 2918525 - 2919157 | 22664.8 |
| duf4212 domain-containing protein | BST98_RS13515 | Not Available | Positive | 2919336 - 2919602 | 10174.5 |
| sodium:solute symporter family protein | BST98_RS13520 | Not Available | Positive | 2919612 - 2921315 | 60771.5 |
| hybrid sensor histidine kinase/response regulator | BST98_RS13525 | Not Available | Negative | 2921387 - 2924869 | 128361.0 |
| 3-phenylpropionate mfs transporter | BST98_RS13530 | Not Available | Negative | 2925009 - 2926187 | 42931.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

