Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small ribosomal subunit biogenesis gtpase rsga | BST98_RS13380 | Not Available | Positive | 2889476 - 2890531 | 39742.9 |
| archaetidylserine decarboxylase | BST98_RS13385 | Not Available | Positive | 2890726 - 2891607 | 32453.7 |
| slc13 family permease | BST98_RS13390 | Not Available | Positive | 2891749 - 2893164 | 50821.6 |
| methyl-accepting chemotaxis protein | BST98_RS13395 | Not Available | Positive | 2893362 - 2895242 | 67909.1 |
| carbonic anhydrase | BST98_RS13400 | Not Available | Positive | 2895417 - 2896145 | 26691.6 |
| elongation factor p--(r)-beta-lysine ligase | BST98_RS13405 | Not Available | Negative | 2896428 - 2897399 | 36313.8 |
| fumarate reductase (quinol) flavoprotein subunit | BST98_RS13410 | Not Available | Positive | 2897954 - 2899762 | 66518.8 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | BST98_RS13415 | Not Available | Positive | 2899762 - 2900502 | 27463.9 |
| fumarate reductase subunit frdc | BST98_RS13420 | Not Available | Positive | 2900505 - 2900888 | 14660.6 |
| fumarate reductase subunit frdd | BST98_RS13425 | Not Available | Positive | 2900899 - 2901261 | 13323.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

