Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate synthase | BST98_RS13230 | Not Available | Negative | 2872941 - 2874257 | 47918.5 |
| duf2065 domain-containing protein | BST98_RS13235 | Not Available | Negative | 2874374 - 2874568 | 6909.68 |
| protease modulator hflc | BST98_RS13240 | Not Available | Negative | 2874656 - 2875666 | 38159.6 |
| ftsh protease activity modulator hflk | BST98_RS13245 | Not Available | Negative | 2875669 - 2876832 | 42527.0 |
| ribosome rescue gtpase hflx | BST98_RS13250 | Not Available | Negative | 2876886 - 2878175 | 48505.2 |
| rna chaperone hfq | BST98_RS13255 | Not Available | Negative | 2878202 - 2878465 | 9832.92 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | BST98_RS13260 | Not Available | Negative | 2878552 - 2879487 | 34797.9 |
| dna mismatch repair endonuclease mutl | BST98_RS13265 | Not Available | Negative | 2879491 - 2881554 | 76724.0 |
| n-acetylmuramoyl-l-alanine amidase | BST98_RS13270 | Not Available | Negative | 2881557 - 2883290 | 62835.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | BST98_RS13275 | Not Available | Negative | 2883296 - 2883760 | 17565.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

