Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydiy family protein | BST98_RS13180 | Not Available | Positive | 2864358 - 2865125 | 28944.1 |
| 50s ribosomal protein l9 | BST98_RS13185 | Not Available | Negative | 2865213 - 2865665 | 15680.9 |
| 30s ribosomal protein s18 | BST98_RS13190 | Not Available | Negative | 2865704 - 2865931 | 8912.89 |
| primosomal replication protein n | BST98_RS13195 | Not Available | Negative | 2865947 - 2866249 | 10953.4 |
| 30s ribosomal protein s6 | BST98_RS13200 | Not Available | Negative | 2866257 - 2866643 | 14839.7 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | BST98_RS13205 | Not Available | Negative | 2866866 - 2867609 | 26704.7 |
| ribonuclease r | BST98_RS13210 | Not Available | Negative | 2867613 - 2870198 | 97654.9 |
| nitric oxide-sensing transcriptional repressor nsrr | BST98_RS13215 | Not Available | Negative | 2870335 - 2870763 | 15645.2 |
| no-inducible flavohemoprotein | BST98_RS13220 | Not Available | Positive | 2870869 - 2872056 | 44542.8 |
| flagellar protein motx | BST98_RS13225 | Not Available | Negative | 2872120 - 2872749 | 23900.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

