Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s8 | BST98_RS01260 | Not Available | Positive | 248493 - 248885 | 14068.5 |
| 50s ribosomal protein l6 | BST98_RS01265 | Not Available | Positive | 248898 - 249431 | 18909.0 |
| 50s ribosomal protein l18 | BST98_RS01270 | Not Available | Positive | 249441 - 249794 | 12613.2 |
| 30s ribosomal protein s5 | BST98_RS01275 | Not Available | Positive | 249807 - 250304 | 17430.2 |
| 50s ribosomal protein l30 | BST98_RS01280 | Not Available | Positive | 250310 - 250489 | 6714.42 |
| 50s ribosomal protein l15 | BST98_RS01285 | Not Available | Positive | 250495 - 250929 | 14881.2 |
| preprotein translocase subunit secy | BST98_RS01290 | Not Available | Positive | 250952 - 252277 | 48158.2 |
| 50s ribosomal protein l36 | BST98_RS01295 | Not Available | Positive | 252307 - 252420 | 4278.5 |
| 30s ribosomal protein s13 | BST98_RS01300 | Not Available | Positive | 252566 - 252922 | 13278.4 |
| 30s ribosomal protein s11 | BST98_RS01305 | Not Available | Positive | 252942 - 253331 | 13892.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

