Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 2829246 - 2830797 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2831184 - 2831299 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2831411 - 2834303 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2834600 - 2836151 | Not Available |
| 3'(2'),5'-bisphosphate nucleotidase cysq | BST98_RS13050 | Not Available | Negative | 2836743 - 2837483 | 27071.5 |
| adenylyl-sulfate kinase | BST98_RS13055 | Not Available | Negative | 2837501 - 2838118 | 23197.9 |
| slc13 family permease | BST98_RS13060 | Not Available | Negative | 2838137 - 2839873 | 62093.8 |
| sulfate adenylyltransferase subunit cysn | BST98_RS13065 | Not Available | Negative | 2839880 - 2841304 | 52456.6 |
| sulfate adenylyltransferase subunit cysd | BST98_RS13070 | Not Available | Negative | 2841316 - 2842224 | 34966.8 |
| siroheme synthase cysg | BST98_RS13075 | Not Available | Negative | 2842237 - 2843646 | 51013.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

