Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | BST98_RS12830 | Not Available | Positive | 2788722 - 2789543 | 31111.3 |
| type 3 dihydrofolate reductase | BST98_RS12835 | Not Available | Negative | 2789650 - 2790132 | 18070.8 |
| threonine/serine exporter family protein | BST98_RS12840 | Not Available | Negative | 2790158 - 2790634 | 17260.2 |
| threonine/serine thre exporter family protein | BST98_RS12845 | Not Available | Negative | 2790631 - 2791419 | 28807.5 |
| obg family gtpase cgta | BST98_RS12850 | Not Available | Negative | 2791581 - 2792756 | 43743.6 |
| dmt family transporter | BST98_RS12855 | Not Available | Negative | 2792846 - 2793766 | 33658.6 |
| 50s ribosomal protein l27 | BST98_RS12860 | Not Available | Negative | 2793832 - 2794089 | 9167.04 |
| 50s ribosomal protein l21 | BST98_RS12865 | Not Available | Negative | 2794108 - 2794419 | 11368.7 |
| octaprenyl diphosphate synthase | BST98_RS12870 | Not Available | Positive | 2794698 - 2795669 | 35248.0 |
| hypothetical protein | BST98_RS12875 | Not Available | Positive | 2795770 - 2795961 | 7235.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

