Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gspb | BST98_RS12630 | Not Available | Negative | 2738927 - 2739829 | 32722.5 |
| aaa family atpase | BST98_RS12635 | Not Available | Negative | 2739832 - 2741475 | 61085.3 |
| multifunctional cca addition/repair protein | BST98_RS12640 | Not Available | Positive | 2741692 - 2742924 | 45919.7 |
| undecaprenyl-diphosphate phosphatase | BST98_RS12645 | Not Available | Negative | 2742970 - 2743773 | 29213.6 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | BST98_RS12650 | Not Available | Negative | 2743783 - 2744277 | 18901.7 |
| dihydroneopterin aldolase | BST98_RS12655 | Not Available | Negative | 2744274 - 2744633 | 13316.2 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | BST98_RS12660 | Not Available | Positive | 2744906 - 2745523 | 22337.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | BST98_RS12665 | Not Available | Negative | 2745600 - 2746619 | 36630.5 |
| 30s ribosomal protein s21 | BST98_RS12670 | Not Available | Positive | 2746872 - 2747087 | 8498.56 |
| gatb/yqey domain-containing protein | BST98_RS12675 | Not Available | Positive | 2747118 - 2747561 | 15962.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

