Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s19 | BST98_RS01210 | Not Available | Positive | 244507 - 244785 | 10455.0 |
| 50s ribosomal protein l22 | BST98_RS01215 | Not Available | Positive | 244800 - 245132 | 12179.9 |
| 30s ribosomal protein s3 | BST98_RS01220 | Not Available | Positive | 245152 - 245850 | 25624.3 |
| 50s ribosomal protein l16 | BST98_RS01225 | Not Available | Positive | 245862 - 246272 | 15293.9 |
| 50s ribosomal protein l29 | BST98_RS01230 | Not Available | Positive | 246272 - 246463 | 7175.66 |
| 30s ribosomal protein s17 | BST98_RS01235 | Not Available | Positive | 246463 - 246717 | 9677.89 |
| 50s ribosomal protein l14 | BST98_RS01240 | Not Available | Positive | 246886 - 247257 | 13646.0 |
| 50s ribosomal protein l24 | BST98_RS01245 | Not Available | Positive | 247270 - 247581 | 11032.6 |
| 50s ribosomal protein l5 | BST98_RS01250 | Not Available | Positive | 247597 - 248136 | 20356.8 |
| 30s ribosomal protein s14 | BST98_RS01255 | Not Available | Positive | 248152 - 248457 | 11511.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

