Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | BST98_RS12370 | Not Available | Positive | 2673797 - 2675473 | 63158.7 |
| abc transporter permease | BST98_RS12375 | Not Available | Positive | 2675620 - 2676606 | 36478.4 |
| abc transporter permease | BST98_RS12380 | Not Available | Positive | 2676609 - 2677634 | 36802.6 |
| abc transporter atp-binding protein | BST98_RS12385 | Not Available | Positive | 2677634 - 2678605 | 36076.0 |
| abc transporter atp-binding protein | BST98_RS12390 | Not Available | Positive | 2678631 - 2679632 | 37339.3 |
| glycoside hydrolase family 9 protein | BST98_RS12395 | Not Available | Positive | 2679729 - 2681468 | 65705.4 |
| n-acetylglucosamine kinase | BST98_RS12400 | Not Available | Positive | 2681461 - 2682354 | 31428.7 |
| beta-n-acetylhexosaminidase | BST98_RS12405 | Not Available | Positive | 2682356 - 2684293 | 73330.2 |
| gh36-type glycosyl hydrolase domain-containing protein | BST98_RS12410 | Not Available | Positive | 2684326 - 2686731 | 90014.6 |
| phosphoglucomutase/phosphomannomutase family protein | BST98_RS12415 | Not Available | Positive | 2686792 - 2688204 | 51961.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

