Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase complex subunit tusb | BST98_RS01160 | Not Available | Positive | 236358 - 236651 | 11125.1 |
| 30s ribosomal protein s12 | BST98_RS01165 | Not Available | Positive | 236828 - 237202 | 13709.8 |
| 30s ribosomal protein s7 | BST98_RS01170 | Not Available | Positive | 237303 - 237773 | 17687.6 |
| elongation factor g | BST98_RS01175 | Not Available | Positive | 237870 - 239975 | 77631.1 |
| elongation factor tu | BST98_RS01180 | Not Available | Positive | 240075 - 241259 | 43012.5 |
| 30s ribosomal protein s10 | BST98_RS01185 | Not Available | Positive | 241772 - 242083 | 11725.3 |
| 50s ribosomal protein l3 | BST98_RS01190 | Not Available | Positive | 242098 - 242727 | 22414.1 |
| 50s ribosomal protein l4 | BST98_RS01195 | Not Available | Positive | 242744 - 243346 | 21843.5 |
| 50s ribosomal protein l23 | BST98_RS01200 | Not Available | Positive | 243343 - 243645 | 11178.7 |
| 50s ribosomal protein l2 | BST98_RS01205 | Not Available | Positive | 243664 - 244488 | 30137.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

