Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family outer membrane protein | BST98_RS11865 | Not Available | Negative | 2537604 - 2539010 | 51789.4 |
| hlyd family type i secretion periplasmic adaptor subunit | BST98_RS11870 | Not Available | Negative | 2539036 - 2540418 | 51544.7 |
| type i secretion system permease/atpase | BST98_RS11875 | Not Available | Negative | 2540415 - 2542592 | 80009.5 |
| ig-like domain-containing protein | BST98_RS11880 | Not Available | Negative | 2542655 - 2551405 | 306272.0 |
| peptide chain release factor 3 | BST98_RS11885 | Not Available | Positive | 2551762 - 2553348 | 59237.6 |
| ribosomal protein s18-alanine n-acetyltransferase | BST98_RS11890 | Not Available | Negative | 2553455 - 2553901 | 17023.3 |
| dna polymerase iii subunit psi | BST98_RS11895 | Not Available | Negative | 2553891 - 2554292 | 15188.3 |
| glycerol dehydrogenase | BST98_RS11900 | Not Available | Negative | 2554415 - 2555509 | 39080.0 |
| gnat family n-acetyltransferase | BST98_RS11905 | Not Available | Negative | 2555696 - 2556202 | 18350.8 |
| ubiquinone anaerobic biosynthesis accessory factor ubit | BST98_RS11910 | Not Available | Negative | 2556192 - 2556713 | 19903.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

