Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exonuclease | BST98_RS11715 | Not Available | Negative | 2498442 - 2500310 | 71383.8 |
| class i sam-dependent methyltransferase | BST98_RS11720 | Not Available | Positive | 2500491 - 2501066 | 21462.1 |
| dead/deah box helicase family protein | BST98_RS11725 | Not Available | Positive | 2501068 - 2503482 | 92592.2 |
| histidine-histamine antiporter | BST98_RS11730 | Not Available | Positive | 2503966 - 2505312 | 47232.8 |
| histidine decarboxylase | BST98_RS11735 | Not Available | Positive | 2505397 - 2506533 | 42937.8 |
| histidine--trna ligase | BST98_RS11740 | Not Available | Positive | 2506604 - 2507863 | 48285.9 |
| sporulation protein | BST98_RS11745 | Not Available | Negative | 2507972 - 2508700 | 26925.8 |
| helix-turn-helix domain-containing protein | BST98_RS11750 | Not Available | Positive | 2509326 - 2509964 | 23396.6 |
| insecticidal delta-endotoxin cry8ea1 family protein | BST98_RS11755 | Not Available | Negative | 2510054 - 2511715 | 63565.2 |
| hypothetical protein | BST98_RS11760 | Not Available | Negative | 2511788 - 2512174 | 13539.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

