Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | BST98_RS11610 | Not Available | Negative | 2475550 - 2476659 | 41361.8 |
| glycosyltransferase family 4 protein | BST98_RS11615 | Not Available | Negative | 2476719 - 2477924 | 44935.9 |
| serine o-acetyltransferase | BST98_RS11620 | Not Available | Negative | 2477980 - 2478486 | 18153.4 |
| capsular biosynthesis protein | BST98_RS11625 | Not Available | Negative | 2478476 - 2479864 | 50931.3 |
| lipopolysaccharide biosynthesis protein | BST98_RS11630 | Not Available | Negative | 2479868 - 2481073 | 46031.1 |
| gumc family protein | BST98_RS11635 | Not Available | Negative | 2481070 - 2483169 | 78316.5 |
| polysaccharide biosynthesis/export family protein | BST98_RS11640 | Not Available | Negative | 2483185 - 2483766 | 21449.0 |
| hypothetical protein | BST98_RS11645 | Not Available | Negative | 2483723 - 2485057 | 51834.1 |
| molecular chaperone dnaj | BST98_RS11650 | Not Available | Negative | 2485620 - 2486759 | 41014.7 |
| molecular chaperone dnak | BST98_RS11655 | Not Available | Negative | 2486856 - 2488772 | 68850.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

