Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-regulated potassium-efflux system ancillary protein kefg | BST98_RS01110 | Not Available | Positive | 229042 - 229623 | 22184.7 |
| glutathione-regulated potassium-efflux system protein kefb | BST98_RS01115 | Not Available | Positive | 229613 - 231433 | 66038.3 |
| yhev family putative zinc ribbon protein | BST98_RS01120 | Not Available | Positive | 231474 - 231683 | 8024.49 |
| peptidylprolyl isomerase | BST98_RS01125 | Not Available | Positive | 231757 - 232326 | 19956.1 |
| slyx family protein | BST98_RS01130 | Not Available | Negative | 232406 - 232627 | 8600.44 |
| wd40 repeat domain-containing protein | BST98_RS01135 | Not Available | Negative | 232634 - 233611 | 35413.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | BST98_RS01140 | Not Available | Positive | 233801 - 234673 | 31292.1 |
| transcriptional regulator | BST98_RS01145 | Not Available | Positive | 234871 - 235593 | 26736.9 |
| sulfurtransferase complex subunit tusd | BST98_RS01150 | Not Available | Positive | 235590 - 235982 | 14087.6 |
| sulfurtransferase complex subunit tusc | BST98_RS01155 | Not Available | Positive | 235994 - 236350 | 13223.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

