Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate signaling complex protein phou | BST98_RS11355 | Not Available | Negative | 2420144 - 2420854 | 26731.4 |
| phosphate abc transporter atp-binding protein pstb | BST98_RS11360 | Not Available | Negative | 2420869 - 2421687 | 30367.5 |
| phosphate abc transporter permease psta | BST98_RS11365 | Not Available | Negative | 2421714 - 2423351 | 61034.6 |
| abc transporter permease subunit | BST98_RS11370 | Not Available | Negative | 2423381 - 2425636 | 83208.4 |
| glycine cleavage system protein r | BST98_RS11375 | Not Available | Positive | 2425820 - 2426341 | 19174.8 |
| polyphosphate kinase 1 | BST98_RS11380 | Not Available | Positive | 2426395 - 2428473 | 80575.1 |
| exopolyphosphatase | BST98_RS11385 | Not Available | Positive | 2428463 - 2429977 | 57160.1 |
| psts family phosphate abc transporter substrate-binding protein | BST98_RS11390 | Not Available | Negative | 2429940 - 2431028 | 39883.1 |
| phosphate regulon sensor histidine kinase phor | BST98_RS11395 | Not Available | Negative | 2431028 - 2432338 | 50278.6 |
| phosphate regulon transcriptional regulator phob | BST98_RS11400 | Not Available | Negative | 2432455 - 2433144 | 26427.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

