Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | BST98_RS11200 | Not Available | Negative | 2389590 - 2390708 | 42007.8 |
| nucleoside-diphosphate kinase | BST98_RS11210 | Not Available | Negative | 2391091 - 2391516 | 15730.8 |
| aminopeptidase pepb | BST98_RS11215 | Not Available | Negative | 2391618 - 2392895 | 45524.8 |
| aminopeptidase pepb | BST98_RS11220 | Not Available | Negative | 2392954 - 2394240 | 45788.6 |
| fe-s cluster assembly protein iscx | BST98_RS11225 | Not Available | Negative | 2394528 - 2394722 | 7598.91 |
| isc system 2fe-2s type ferredoxin | BST98_RS11230 | Not Available | Negative | 2394785 - 2395123 | 12307.5 |
| fe-s protein assembly chaperone hsca | BST98_RS11235 | Not Available | Negative | 2395126 - 2396979 | 65981.8 |
| co-chaperone hscb | BST98_RS11240 | Not Available | Negative | 2397114 - 2397629 | 20247.0 |
| iron-sulfur cluster assembly protein isca | BST98_RS11245 | Not Available | Negative | 2397705 - 2398028 | 11528.7 |
| fe-s cluster assembly scaffold iscu | BST98_RS11250 | Not Available | Negative | 2398046 - 2398432 | 13687.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

