Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS22315 | Not Available | Positive | 2367865 - 2368011 | 5697.09 |
| trna adenosine(34) deaminase tada | BST98_RS11105 | Not Available | Negative | 2368086 - 2368598 | 18758.5 |
| lysr substrate-binding domain-containing protein | BST98_RS11110 | Not Available | Negative | 2368634 - 2369521 | 33449.4 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | BST98_RS11115 | Not Available | Positive | 2369744 - 2370874 | 40246.5 |
| s-formylglutathione hydrolase | BST98_RS11120 | Not Available | Positive | 2370966 - 2371811 | 31533.1 |
| abgt family transporter | BST98_RS11125 | Not Available | Negative | 2371954 - 2373516 | 55188.9 |
| glutamine-hydrolyzing gmp synthase | BST98_RS11130 | Not Available | Negative | 2373986 - 2375569 | 58700.3 |
| imp dehydrogenase | BST98_RS11135 | Not Available | Negative | 2375684 - 2377147 | 51938.6 |
| exodeoxyribonuclease vii large subunit | BST98_RS11140 | Not Available | Positive | 2377458 - 2378804 | 50291.7 |
| zinc ribbon domain-containing protein | BST98_RS11145 | Not Available | Negative | 2378922 - 2379158 | 8838.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

