Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine n-succinyltransferase | BST98_RS01060 | Not Available | Positive | 219230 - 220249 | 38043.5 |
| succinylglutamate-semialdehyde dehydrogenase | BST98_RS01065 | Not Available | Positive | 220260 - 221723 | 52731.9 |
| duf1338 domain-containing protein | BST98_RS01070 | Not Available | Positive | 221754 - 222560 | 30299.9 |
| hypothetical protein | BST98_RS01075 | Not Available | Negative | 222662 - 222844 | 6874.07 |
| camp-activated global transcriptional regulator crp | BST98_RS01080 | Not Available | Negative | 223002 - 223634 | 23606.9 |
| osmc family protein | BST98_RS01085 | Not Available | Positive | 224021 - 224425 | 14105.0 |
| phosphoribulokinase | BST98_RS01090 | Not Available | Negative | 224475 - 225344 | 32739.4 |
| yheu family protein | BST98_RS01095 | Not Available | Negative | 225477 - 225692 | 8201.75 |
| hydrolase | BST98_RS01100 | Not Available | Negative | 225733 - 226734 | 37565.2 |
| abc transporter atp-binding protein | BST98_RS01105 | Not Available | Negative | 226886 - 228814 | 73225.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

